Behind the folding funnel diagram
M Karplus - Nature chemical biology, 2011 - nature.com
This Commentary clarifies the meaning of the funnel diagram, which has been widely cited
in papers on protein folding. To aid in the analysis of the funnel diagram, this Commentary …
in papers on protein folding. To aid in the analysis of the funnel diagram, this Commentary …
The energy landscape theory of protein folding: insights into folding mechanisms and scenarios
Publisher Summary This chapter presents an overview of the theoretical aspects of the “new
view” of protein folding based on the energy landscape theory and the funnel concept. The …
view” of protein folding based on the energy landscape theory and the funnel concept. The …
General mechanism of two-state protein folding kinetics
GC Rollins, KA Dill - Journal of the American Chemical Society, 2014 - ACS Publications
We describe here a general model of the kinetic mechanism of protein folding. In the Foldon
Funnel Model, proteins fold in units of secondary structures, which form sequentially along …
Funnel Model, proteins fold in units of secondary structures, which form sequentially along …
Theory of protein folding
JN Onuchic, PG Wolynes - Current opinion in structural biology, 2004 - Elsevier
Protein folding should be complex. Proteins organize themselves into specific three-
dimensional structures, through a myriad of conformational changes. The classical view of …
dimensional structures, through a myriad of conformational changes. The classical view of …
Protein folding funnels: a kinetic approach to the sequence-structure relationship.
PE Leopold, M Montal… - Proceedings of the …, 1992 - National Acad Sciences
A lattice model of protein folding is developed to distinguish between amino acid sequences
that do and do not fold into unique conformations. Although Monte Carlo simulations provide …
that do and do not fold into unique conformations. Although Monte Carlo simulations provide …
Protein folding mechanisms: new methods and emerging ideas
DJ Brockwell, DA Smith, SE Radford - Current opinion in structural biology, 2000 - Elsevier
During the past year, advances in our understanding of folding mechanisms have been
made through detailed experimental and theoretical studies of a number of proteins. The …
made through detailed experimental and theoretical studies of a number of proteins. The …
[CITATION][C] Finding the right fold
CM Dobson - Nature Structural Biology, 1995 - nature.com
news and views Page 1 TG) 1995 Nature Publishing Group http://www.nature.com/nsmb
news and views Oxford Centre for Molecular Sciences, New Chemistry Laboratory …
news and views Oxford Centre for Molecular Sciences, New Chemistry Laboratory …
Protein folding and misfolding: mechanism and principles
SW Englander, L Mayne, MMG Krishna - Quarterly reviews of …, 2007 - cambridge.org
Two fundamentally different views of how proteins fold are now being debated. Do proteins
fold through multiple unpredictable routes directed only by the energetically downhill nature …
fold through multiple unpredictable routes directed only by the energetically downhill nature …
The fundamentals of protein folding: bringing together theory and experiment
CM Dobson, M Karplus - Current opinion in structural biology, 1999 - Elsevier
Experimental and theoretical studies together are providing insights into the mechanism by
which proteins fold. Our present knowledge of the essential aspects of the folding reaction is …
which proteins fold. Our present knowledge of the essential aspects of the folding reaction is …
Searching for “downhill scenarios” in protein folding
WA Eaton - Proceedings of the National Academy of …, 1999 - National Acad Sciences
The genome project, with the discovery of thousands of new protein sequences every year,
has created a revolution in protein physics, chemistry, and biology. This has led to a …
has created a revolution in protein physics, chemistry, and biology. This has led to a …