Theory of protein folding
JN Onuchic, PG Wolynes - Current opinion in structural biology, 2004 - Elsevier
Protein folding should be complex. Proteins organize themselves into specific three-
dimensional structures, through a myriad of conformational changes. The classical view of …
dimensional structures, through a myriad of conformational changes. The classical view of …
The energy landscape theory of protein folding: insights into folding mechanisms and scenarios
Publisher Summary This chapter presents an overview of the theoretical aspects of the “new
view” of protein folding based on the energy landscape theory and the funnel concept. The …
view” of protein folding based on the energy landscape theory and the funnel concept. The …
An expanding arsenal of experimental methods yields an explosion of insights into protein folding mechanisms
AI Bartlett, SE Radford - Nature structural & molecular biology, 2009 - nature.com
In recent years, improvements in experimental techniques and enhancements in computing
power have revolutionized our understanding of the mechanisms of protein folding. By …
power have revolutionized our understanding of the mechanisms of protein folding. By …
Matching theory and experiment in protein folding
There has been considerable progress made over the past year in linking experimental and
theoretical approaches to protein folding. Recent results from several independent lines of …
theoretical approaches to protein folding. Recent results from several independent lines of …
Simple physical models connect theory and experiment in protein folding kinetics
Our understanding of the principles underlying the protein-folding problem can be tested by
developing and characterizing simple models that make predictions which can be compared …
developing and characterizing simple models that make predictions which can be compared …
The protein-folding problem, 50 years on
KA Dill, JL MacCallum - science, 2012 - science.org
The protein-folding problem was first posed about one half-century ago. The term refers to
three broad questions:(i) What is the physical code by which an amino acid sequence …
three broad questions:(i) What is the physical code by which an amino acid sequence …
Simulations of protein folding and unfolding
CL Brooks III - Current opinion in structural biology, 1998 - Elsevier
The 'new view'of protein folding is based on a statistical analysis of the landscape for protein
folding. This perspective leads to the investigation of the statistical distributions of protein …
folding. This perspective leads to the investigation of the statistical distributions of protein …
Funnels, pathways, and the energy landscape of protein folding: a synthesis
JD Bryngelson, JN Onuchic, ND Socci… - Proteins: Structure …, 1995 - Wiley Online Library
The understanding, and even the description of protein folding is impeded by the complexity
of the process. Much of this complexity can be described and understood by taking a …
of the process. Much of this complexity can be described and understood by taking a …
FROM FOLDING THEORIES TO FOLDING PROTEINS: A Review and Assessment of Simulation Studies of Protein Folding and Unfolding
JE Shea, CL Brooks III - Annual review of physical chemistry, 2001 - annualreviews.org
▪ Abstract Beginning with simplified lattice and continuum “minimalist” models and
progressing to detailed atomic models, simulation studies have augmented and directed …
progressing to detailed atomic models, simulation studies have augmented and directed …
Conformational dynamics and ensembles in protein folding
V Muñoz - Annu. Rev. Biophys. Biomol. Struct., 2007 - annualreviews.org
Recent experimental developments are changing the ways we interpret experimental data in
protein folding, leading to a closer connection with theory and an improved understanding of …
protein folding, leading to a closer connection with theory and an improved understanding of …