Globular protein folding in vitro and in vivo

M Gruebele, K Dave, S Sukenik - Annual review of biophysics, 2016 - annualreviews.org
In vitro, computational, and theoretical studies of protein folding have converged to paint a
rich and complex energy landscape. This landscape is sensitively modulated by …

Theoretical perspectives on protein folding

D Thirumalai, EP O'Brien, G Morrison… - Annual review of …, 2010 - annualreviews.org
Understanding how monomeric proteins fold under in vitro conditions is crucial to describing
their functions in the cellular context. Significant advances in theory and experiments have …

Theory of protein folding

JN Onuchic, PG Wolynes - Current opinion in structural biology, 2004 - Elsevier
Protein folding should be complex. Proteins organize themselves into specific three-
dimensional structures, through a myriad of conformational changes. The classical view of …

An expanding arsenal of experimental methods yields an explosion of insights into protein folding mechanisms

AI Bartlett, SE Radford - Nature structural & molecular biology, 2009 - nature.com
In recent years, improvements in experimental techniques and enhancements in computing
power have revolutionized our understanding of the mechanisms of protein folding. By …

Folding and stability of globular proteins and implications for function

C Travaglini-Allocatelli, Y Ivarsson, P Jemth… - Current opinion in …, 2009 - Elsevier
The description of protein folding pathways and the principles that govern them has proven
to be one of the most difficult problems to be solved in structural biology. But the combination …

Dynamics, energetics, and structure in protein folding

AN Naganathan, U Doshi, A Fung, M Sadqi… - Biochemistry, 2006 - ACS Publications
For many decades, protein folding experimentalists have worked with no information about
the time scales of relevant protein folding motions and without methods for estimating the …

Folding proteins: Finding a needle in a haystack

KA Dill - Current Opinion in Structural Biology, 1993 - Elsevier
I revisit the Levinthal paradox of protein folding kinetics. Efficient computational methods are
now finding or approaching native states on model free energy landscapes for small …

Protein folding rates and stability: how much is there beyond size?

D De Sancho, U Doshi, V Munoz - Journal of the American …, 2009 - ACS Publications
An intriguing feature of protein folding is that the overall behavior obeys simple physical
rules, but the finer details show a great deal of complexity. The scaling of thermodynamic …

Protein folding kinetics and thermodynamics from atomistic simulation

S Piana, K Lindorff-Larsen… - Proceedings of the …, 2012 - National Acad Sciences
Advances in simulation techniques and computing hardware have created a substantial
overlap between the timescales accessible to atomic-level simulations and those on which …

Protein folding landscapes in the living cell

S Ebbinghaus, M Gruebele - The Journal of Physical Chemistry …, 2011 - ACS Publications
This Perspective highlights studies of protein structure, stability, and folding kinetics that can
now be carried out in prokaryotic and eukaryotic cells. The general features of cooperative …