| An integrative approach to protein sequence design through multiobjective optimization L Hong, T Kortemme bioRxiv, 2024 | | 2024 |
| Targeting high-risk multiple myeloma genotypes with optimized anti-CD70 CAR-T cells C Kasap, A Izgutdina, B Patiño-Escobar, A Kang, N Chilakapati, N Akagi, ... bioRxiv, 2024 | | 2024 |
| De novo protein design—From new structures to programmable functions T Kortemme Cell 187 (3), 526-544, 2024 | 16 | 2024 |
| Deep learning guided design of dynamic proteins AB Guo, D Akpinaroglu, M Kelly, T Kortemme bioRxiv, 2024.07. 17.603962, 2024 | | 2024 |
| Ace2 compositions and methods A Glasgow, J Glasgow, JA Wells, X Zhou, T Kortemme, LUI Irene US Patent App. 17/997,877, 2023 | | 2023 |
| Multi-input drug-controlled switches of mammalian gene expression based on engineered nuclear hormone receptors S Kretschmer, N Perry, Y Zhang, T Kortemme ACS Synthetic Biology 12 (7), 1924-1934, 2023 | 2 | 2023 |
| Detection assay for sars-cov-2 virus JA Wells, S Elledge, X Zhou, T Kortemme, J Glasgow, A Glasgow, ... US Patent App. 17/997,875, 2023 | | 2023 |
| Emerging maps of allosteric regulation in cellular networks CJP Mathy, T Kortemme Current opinion in structural biology 80, 102602, 2023 | 3 | 2023 |
| A complete allosteric map of a GTPase switch in its native cellular network CJP Mathy, P Mishra, JM Flynn, T Perica, D Mavor, DNA Bolon, ... Cell systems 14 (3), 237-246. e7, 2023 | 7 | 2023 |
| Ligand-specific changes in conformational flexibility mediate long-range allostery in the lac repressor A Glasgow, HT Hobbs, ZR Perry, ML Wells, S Marqusee, T Kortemme Nature communications 14 (1), 1179, 2023 | 9 | 2023 |
| Computational pipeline provides mechanistic understanding of Omicron variant of concern neutralizing engineered ACE2 receptor traps SG Remesh, GE Merz, AF Brilot, US Chio, AN Rizo, TH Pospiech, I Lui, ... Structure 31 (3), 253-264. e6, 2023 | 4 | 2023 |
| Structure-conditioned masked language models for protein sequence design generalize beyond the native sequence space D Akpinaroglu, K Seki, A Guo, E Zhu, MJS Kelly, T Kortemme bioRxiv, 2023.12. 15.571823, 2023 | 3 | 2023 |
| Correction to “the rosetta all-atom energy function for macromolecular modeling and design” RF Alford, A Leaver-Fay, JR Jeliazkov, MJ O’Meara, FP DiMaio, H Park, ... Journal of chemical theory and computation 18 (7), 4594-4594, 2022 | 3 | 2022 |
| A complete allosteric map of a GTPase switch in its native network [preprint] CJP Mathy, P Mishra, JM Flynn, T Perica, D Mavor, DNA Bolon, ... bioRxiv, 2022 | | 2022 |
| A complete allosteric map of a GTPase switch in its native network CJP Mathy, P Mishra, JM Flynn, T Perica, D Mavor, DNA Bolon, ... bioRxiv, 2022.04. 13.488230, 2022 | 2 | 2022 |
| Advances in the computational design of small-molecule-controlled protein-based circuits for synthetic biology S Kretschmer, T Kortemme Proceedings of the IEEE 110 (5), 659-674, 2022 | 6 | 2022 |
| Accurate positioning of functional residues with robotics-inspired computational protein design C Krivacic, K Kundert, X Pan, RA Pache, L Liu, S O Conchúir, ... Proceedings of the National Academy of Sciences 119 (11), e2115480119, 2022 | 9 | 2022 |
| Design principles of protein switches RG Alberstein, AB Guo, T Kortemme Current opinion in structural biology 72, 71-78, 2022 | 30 | 2022 |
| Erratum: The Rosetta All-Atom Energy Function for Macromolecular Modeling and Design (Journal of Chemical Theory and Computation (2017) 13: 6 (3031-3048 RF Alford, A Leaver-Fay, JR Jeliazkov, MJ O'Meara, FP Dimaio, H Park, ... Journal of chemical theory and computation, 2022 | | 2022 |
| Ligand-induced changes in dynamics mediate long-range allostery in the lac repressor A Glasgow, HT Hobbs, ZR Perry, S Marqusee, T Kortemme bioRxiv, 2021.11. 30.470682, 2021 | 3 | 2021 |
David BakerUniversity of WashingtonVerified email at uw.edu
