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@monarch-initiative

Monarch Initiative

Cross-species disease discovery and diagnosis

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  1. mondo mondo Public template

    Mondo Disease Ontology

    Jupyter Notebook 224 52

  2. koza koza Public

    Data transformation framework for LinkML data models

    Python 45 3

  3. MAxO MAxO Public

    Medical action ontology

    HTML 48 5

  4. helpdesk helpdesk Public

    The Monarch Initiative Helpdesk

    7

  5. monarch-ingest monarch-ingest Public

    Data ingest application for Monarch Initiative knowledge graph using Koza

    Python 15 1

  6. monarch-app monarch-app Public

    Monarch Initiative website and API

    Vue 16 3

Repositories

Showing 10 of 229 repositories
  • ontogpt Public

    LLM-based ontological extraction tools, including SPIRES

    monarch-initiative/ontogpt’s past year of commit activity
    Jupyter Notebook 557 BSD-3-Clause 69 58 7 Updated Jul 24, 2024
  • matrix-disease-list Public

    The MATRIX disease list seeks to filter the set of all diseases and their categories to those that can be specifically targeted by a drug.

    monarch-initiative/matrix-disease-list’s past year of commit activity
    Shell 0 0 0 1 Updated Jul 24, 2024
  • mondo-curation-analysis Public
    monarch-initiative/mondo-curation-analysis’s past year of commit activity
    Jupyter Notebook 0 0 1 0 Updated Jul 24, 2024
  • MAxO Public

    Medical action ontology

    monarch-initiative/MAxO’s past year of commit activity
    HTML 48 CC-BY-4.0 5 32 0 Updated Jul 24, 2024
  • monarch-app Public

    Monarch Initiative website and API

    monarch-initiative/monarch-app’s past year of commit activity
    Vue 16 BSD-3-Clause 3 120 (3 issues need help) 7 Updated Jul 24, 2024
  • genophenocorr Public

    Genotype Phenotype Correlation

    monarch-initiative/genophenocorr’s past year of commit activity
    Jupyter Notebook 4 MIT 1 25 2 Updated Jul 24, 2024
  • mondo Public template

    Mondo Disease Ontology

    monarch-initiative/mondo’s past year of commit activity
    Jupyter Notebook 224 CC-BY-4.0 52 393 (2 issues need help) 51 Updated Jul 24, 2024
  • phenopacket-store Public

    Collection of phenopackets

    monarch-initiative/phenopacket-store’s past year of commit activity
    Jupyter Notebook 13 BSD-3-Clause 4 13 0 Updated Jul 24, 2024
  • malco Public

    Multilingual Analysis of LLMs for Clinical Observations

    monarch-initiative/malco’s past year of commit activity
    Python 2 BSD-3-Clause 0 1 1 Updated Jul 24, 2024
  • automaxo Public
    monarch-initiative/automaxo’s past year of commit activity
    Python 1 MIT 1 3 0 Updated Jul 24, 2024
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