Observing the cell in its native state: Imaging subcellular dynamics in multicellular organisms
INTRODUCTION Organisms live by means of the complex, dynamic, three-dimensional (3D)
interplay between millions of components, from the molecular to the multicellular. Visualizing …
interplay between millions of components, from the molecular to the multicellular. Visualizing …
Microscopy image browser: a platform for segmentation and analysis of multidimensional datasets
I Belevich, M Joensuu, D Kumar, H Vihinen… - PLoS …, 2016 - journals.plos.org
Understanding the structure–function relationship of cells and organelles in their natural
context requires multidimensional imaging. As techniques for multimodal 3-D imaging have …
context requires multidimensional imaging. As techniques for multimodal 3-D imaging have …
An objective comparison of cell-tracking algorithms
We present a combined report on the results of three editions of the Cell Tracking
Challenge, an ongoing initiative aimed at promoting the development and objective …
Challenge, an ongoing initiative aimed at promoting the development and objective …
[HTML][HTML] Inflation-collapse dynamics drive patterning and morphogenesis in intestinal organoids
NP Tallapragada, HM Cambra, T Wald, SK Jalbert… - Cell stem cell, 2021 - cell.com
How stem cells self-organize to form structured tissues is an unsolved problem. Intestinal
organoids offer a model of self-organization as they generate stem cell zones (SCZs) of …
organoids offer a model of self-organization as they generate stem cell zones (SCZs) of …
Enhancer priming enables fast and sustained transcriptional responses to notch signaling
Information from developmental signaling pathways must be accurately decoded to
generate transcriptional outcomes. In the case of Notch, the intracellular domain (NICD) …
generate transcriptional outcomes. In the case of Notch, the intracellular domain (NICD) …
Mountain railway alignment optimization with bidirectional distance transform and genetic algorithm
W Li, H Pu, P Schonfeld, J Yang… - … ‐Aided Civil and …, 2017 - Wiley Online Library
Various challenging constraints must be satisfied in railway alignment design for
topographically complex mountainous regions. The alignment design for such environments …
topographically complex mountainous regions. The alignment design for such environments …
[HTML][HTML] Quantifying receptor trafficking and colocalization with confocal microscopy
Confocal microscopy is a powerful tool for the study of cellular receptor trafficking and
endocytosis. Unbiased and robust image analysis workflows are required for the …
endocytosis. Unbiased and robust image analysis workflows are required for the …
Direct simulations of pore-scale water transport through diffusion media
FC Cetinbas, RK Ahluwalia, AD Shum… - Journal of The …, 2019 - iopscience.iop.org
A numerical framework is developed for simulating pore-scale liquid water transport in
polymer electrolyte fuel cell (PEFC) diffusion media (DM) as measured by X-ray computed …
polymer electrolyte fuel cell (PEFC) diffusion media (DM) as measured by X-ray computed …
Notch-dependent and-independent transcription are modulated by tissue movements at gastrulation
J Falo-Sanjuan, S Bray - Elife, 2022 - elifesciences.org
Cells sense and integrate external information from diverse sources that include mechanical
cues. Shaping of tissues during development may thus require coordination between …
cues. Shaping of tissues during development may thus require coordination between …
Dose-volume histogram prediction using density estimation
JS Munter, J Sjölund - Physics in Medicine & Biology, 2015 - iopscience.iop.org
Abstract Knowledge of what dose-volume histograms can be expected for a previously
unseen patient could increase consistency and quality in radiotherapy treatment planning …
unseen patient could increase consistency and quality in radiotherapy treatment planning …